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The array was evaluated using multiple primer pairs.
The array was evaluated by studying morphology, proliferation and differentiation of primary human keratinocytes/fibroblasts. Major differences were observed.
The overall intensity of the array was evaluated at the individual probe level.
The statistical significance of the GO class containing n genes represented on the array was evaluated by computing the empirical distribution of these summary statistics in random samples of n genes.
Therefore, the performance of the array was evaluated by technical replications that used a single RNA sample from one of the untreated cultures for three hybridization experiments to determine variation arising during all stages of data generation.
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The quality of the arrays was evaluated through several diagnostic plots.
The expression of 10 G. intraradices genes identified on the arrays was evaluated in RNA from both the colonized root pieces and the LM cell-type specific samples (Table 1; Figure 6).
Hybridization performance of this array was evaluated using Atlantic salmon, rainbow trout, coho salmon, brook trout and lake whitefish RNA obtained from liver organs.
Interactions between HAMLET and the immobilized proteins on the arrays were evaluated by their Z-Score rank within the array and compared to the interactions observed on the negative control array.
Scans of the arrays were evaluated using Affymetrix Microarray Suite 5.0 (Affymetrix Inc).
The geometry of the microelectrode array was evaluated by optical microscopy, white light surface profiling and scanning electron microscopy.
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