Sentence examples for the alignment provides from inspiring English sources

Aligning the sequences and counting the nucleotides at each position in the alignment provides a count matrix similar to those found in databases as TRANSFAC [1] and JASPAR [2].

The alignment provides arguments for cohesive identity and access management (IAM) in a business network.

Because of this finding, the alignment provides a robust starting point for homology modeling of the permeation paths of other K+-selective channel classes and elucidation of sequence-function relationships therein.

We extracted the orthologous sequences of all Mel sequences in the Pse genome using the alignment provided at UCSC [69].

To determine the boundaries of the DHHC domains, we selected the regions that flank the DHHC motif, which are highly conserved and contain almost no gaps, as shown in the alignment provided in File S1.

The alignment provided in figure 5B indicates the presence of similar motifs in the AmphiCYP19 sequence we now describe.

Upon launching, RAxML initially optimizes the Maximum Likelihood model parameters and computes all branch-lengths of the reference tree, based on the alignment provided.

For instance alignments can be edited, coloured, sorted and outputted for publication, while phylogenetic trees can also be produced from the alignment, providing insights into evolution and the conservation of amino acid residues.

Considering the contributions of the edge and node score, see Table 2, we see that the alignment provided by GraphAlignment is in that case dominantly driven by the edge score.

A study of the relative position of introns in the cox1 gene revealed that the Tetilla sp. intron is inserted at position 850 of the alignment provided in Additional file 1.

Suggestion 2: Possibly better to try MAFFT also in profile to profile mode (−−seed option) or, preferable, show the alignment provided by the same method that estimated the significant hit and show that the hit region is not dominated by low complexity.