Sentence examples for the alignment for which from inspiring English sources

In this case we consider as correct an alignment where the current range image is attached correctly to an existing cluster (that is, we consider as erroneous only the alignment for which a new cluster is created, rather than all the other images which may attach to it correctly).

Thus, columns in the alignment for which "positional homology" cannot be robustly determined must be excluded from subsequent analyses.

Columns in the alignment for which a gap was present in >10% of the sequences were removed.

We considered only portions of the alignment for which each species had at least one sequenced base 5' to the region in question, and at least one sequenced base 3'.

Finally, as the amplicon set was sheared prior to sequencing, multiple contigs per amplicon were also formed as a result of gaps within the alignment, for which 454 reads failed to cover the length of the amplicon.

Second, I propose considering site-wise concordance factors: The site-wise concordance factor of a clade is the proportion of sites (rather than loci) in the alignment for which the sites' true underlying tree has the clade.

Third, we curated the alignments for which we detected positive selection manually.

Regions of the alignments for which we had no Liriodendron cDNA sequence were omitted from the analysis.

We analyzed the 4901 (90.8%) of the alignments for which phylogenies could be computed for all 36 parameter combinations (i.e. at least four sequences were retained).

We fully agree that it is only appropriate to use an example from this particular study, so in the revised version Figure shows the alignment for KOG0100 which is part of the present analysis.

We name "work positions" positions in the multiple alignment for which at least 8 amino acids are aligned.