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Exact(4)
The resulting paralogs often have partly overlapping, partly distinct functions that together correspond to the functions of the single ortholog in other vertebrates.
For example, the three clades (N5 N7) that together correspond to Clade VII of Jin et al. are consistently shown as trichotomous in our nuclear trees.
Current transcriptome resources of the guppy include a database of Sanger-sequenced expressed sequence tags (EST) and a more recent 454 sequenced transcriptome, that together correspond to roughly 9,000 unique transcripts from embryos and adult guppies originating from several different populations [ 46, 47].
The ROC curves (Additional file 14: Figure S10) highlight a strong enrichment of ZGA predicted CRMs for Zelda (1 h, 2 h, 3 h), TRL (0-8 h), CBP (0-4 h) and H3K4me1 (0-4 h) as well as DNAse1 hypersensitive sites (stage 5) that together correspond to signatures of active enhancer.
Similar(56)
In one additional case, the decision to break or join was ambiguous, because five populations each contained two LGs that together corresponded to single LGs in the other five populations.
T-tests performed to compare each cluster with the other 3 clusters showed that the first 3 clusters corresponded to our clusters A (6 samples), B (14 samples) and C (12 samples), while the remaining 14 tumors that grouped together corresponded to our D and E tumors (see Figure S6).
Note that a full-length TE copy may correspond to two TE fragments, which, when connected together, correspond to the full TE consensus sequence.
The absence of an amplicon that corresponded to exon joining, together with the correct amplification of the single exon, was interpreted as an indication of misprediction.
BVMOs that cluster together with BVMOLepto have never been evaluated on these ketones before, thus available data correspond to distant BVMOs.
It then scours the genome for the genetic sequence that correspond to the amino acid sequence.
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Justyna Jupowicz-Kozak
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