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Our results suggest that differentially phosphorylated proteins could be considered as more promising markers of differentiation for NB than differentially expressed proteins.
Differentially expressed links were much less common than differentially expressed genes.
Further, their approach was restricted to identification of individual DMPs rather than differentially methylated regions (DMRs).
Genes with small p-values have a substantially higher fraction of hits with "psoriasis" than differentially expressed genes on average.
In contrast, contextual gene sets were identified with more focus on biological processes rather than differentially expressed signatures of subtypes.
Although we find that the number of differentially expressed genes is larger than differentially spliced, the numbers are of similar orders of magnitude.
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Transcript and metabolic profiling data revealed more than 7000 differentially expressed genes and 80 differentially accumulated metabolites, respectively, in the resistant host.
This experimental design identified more than 600 differentially expressed genes and established MIF as a key player in the wound healing process, regulating many novel repair/inflammation-associated gene targets.
75 CpG sites were more than 15% differentially methylated in fibroblasts upon aging.
1060 CpG sites were more than 15% differentially methylated in MSC of young and elderly donors [14] (Figure 3B).
In other words, diet-related genes exhibit larger expression divergence than most differentially expressed genes in liver.
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