We tested the orientation of gene pairs as an explanation for sub-megabase range coexpression.
To test the orientation encoding after a transition, the same grating as above was preceded by a 250 ms pattern (0, 10 and 60 Cd/m2, see Figure 1C) so as to produce the stimulus transition shown in Figure 1C.
Long-range PCR was used to test the orientation of large repeats and bridge the remaining gaps.
Using a Mann-Whitney-U test, we tested whether the Orientation Index is affected by the box position.
For all birds, both experimentally and naturally displaced, we tested the migratory orientation when the birds departed from the Faroe Islands 11 September to 14 October.
Therefore, we also tested the antisense orientation in the episome (pR LMNA as) E), which did not show any enhancer blocking activity.
Since TR2 was a unilateral amputee and had a fully intact and normal right side, we also tested the grating orientation threshold for her right index fingertip and the back of her hand.
In addition to the polymer model for MTs, we test the net orientation of the cytoskeleton by comparing with a second model in which MTs are nucleated continuously around the cell membrane and act as straight rods with a given length distribution.
To test for consistency of orientation bias we tested also the orientation biases for all sessions together (also on the population level).
When testing the system at different orientations, the bottom heat mode was found to be the best option.
