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In all epidemiologic research involving psychological testing, the list of these variables is potentially very long, and researchers appear divided about which to include.
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Patient interviews were performed to test the list of concepts and to collect patient responses in their own wording to create the items of the questionnaire.
We tested the list of validated targets for statistical enrichment of GO categories and pathways, using the initial 21,121 screened genes/factors as a reference (Table S3).
Two A. thaliana protein sequence sources were tested: the list of 995 TFs cloned in the Y1H library (from REGIA) and the TAIR9 longest transcript proteome [ 64].
In turn, we also tested the list of false positives, for which our algorithm predicted 33 genes to be essential, in contrast to the experimental high throughput screen.
We tested the list of significantly positive and negative correlated genes for enrichment in functional annotation groups as defined in the Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases [ 28].
We then tested the lists of induced and repressed genes for overrepresentation of GO terms by applying the exact Fisher's test.
Being the globally optimal decision making result of testing the complete list of all feasible hypotheses, the DFTCOMM method guarantees to require a fewer or at most the same number of arithmetic operations for its execution than any other of the competing pruning-decomposition-based methods reported in the literature.
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