Sentence examples for test neutrality from inspiring English sources

To test neutrality as a feature, we use neutrality as both an independent classifier and as part of an existing feature set for comparison with existing 6-feature SVMs [ 19].

Chi-squared and Neutrality Index are the outputs of the McDonald-Kreitman test; neutrality index indicates the extent to which the levels of variation depart from the expected in the neutral model with values greater than 1 indicating an excess of polymorphism and hence negative selection.

A recent large-scale polymorphism study in A. thaliana showed a continuous gradient of variations along eastern western Europe (Platt et al., 2010), suggesting that methods are still required to estimate time and to test neutrality within a continuous population structure.

In simulations testing neutrality based on the allele frequency spectrum, we used the observed number of segregating sites observed in the population under question.

(a) Tests of neutrality-Tajima's D and Fu and Li's F* and D* tests Neutrality tests were used as an indication of recent population expansion.

Thus, when testing neutrality, it is important to condition on a demographic scenario that is conservative with respect to the manner in which neutrality may be rejected.

However, this is a conservative test for selection, comparing dN and dS amongst closely replated species tests neutrality by examining deviations within the phylogeny for the dN/dS ratio.

Correction for multiple testing (neutrality two-tailed and HWE tests) was carried out according to Storey [2002] using a false discovery rate of 10% (http://faculty.washington.edu/jstorey/qvalue/index.html).html

This is a conservative test because we seek to determine the robustness of this method for testing neutrality when insertion alleles are not at equilibrium and display widely different frequencies.

Although these two statistics were originally introduced as tests of neutrality, Fu's test is considered a powerful test to detect past population expansion.

Moreover, McDonald and Kreitman's test of neutrality indicated no significant deviations from neutrality between M and F sequences (Table 2).