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However, cone penetration test (CPT) is becoming increasingly popular as an in situ test for site investigation and geotechnical design.
Other clinical variables including gender, site of primary tumor (colon, sigmoid-rectum junction, rectum, other sites), and age were not significantly associated with objective tumor response (p = 0.491, 0.490 and 0.904, respectively; p values were obtained by Fisher's exact test for site and gender and by Wald's test for age).
aAverage Ka/ Ks ratio of each gene family calculated by MEGA; b dN/ dS ratio for each gene family using branch model; 2Δln represents the result of LR test for site model; ** represent highly significant (2Δln > 9.210, p < 0.01) tests for positive selection between model M7 and M8.
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The CODEML program in the PAML4.2 package [ 94] was used to test for site-specific evidence of positive selection while correcting for nucleotide bias [ 95].
To test for site-specific recombination, we initially sought to use a gain-of-function strategy whereby excision of a transgene would lead to promoter fusion with a previously distal marker [ 18].
We further performed the branch-site models A and B [ 55] to test for sites potentially under positive selection on TFIIAγ1 and TFIIAγ5 branches, respectively.
Models that allow ω to vary across sites were implemented in order to test for sites that may be under positive selection [ 40- 42]; however, none of these tests were able to detect evidence of positive selection in our data set.
We use an LRT comparing M0 (one-ratio) with M3 (discrete) (κ = 3) to test for variable selective pressure among sites, and two LRTs to test for sites evolving by positive selection, comparing: M1a (Nearly Neutral) against M2a (Positive Selection), and M7 (beta) (κ = 10) against M8 (beta & ω) (κ = 10).
We tested for site and treatment effects on the relationships between stem, aboveground (stem, branches, foliage) and total (aboveground + roots) biomass production versus intercepted light (light use efficiency, LUE).
Figure 2 and Supplemental Material, Table 2 (describe289/ehp.0900793.S1) describe 44 sites where nanoremediation methods have been tested for site remediation.
Association of baseline nPEP questions with demographic characteristics was assessed using Chi-squared tests for site and race/ethnicity, and test for trend for age and education.
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