Sentence examples for tertiary model from inspiring English sources

Tertiary model of OfC1Inh disclosed its active site topology.

This work presents a full tertiary model of the M.BssHII methyltransferase (MTase) complexed with substrate DNA and cofactor S-adenosyl-l-methionine, built by homology modelling based on previously solved complete structures of DNA MTases M.HaeIII and M.HhaI.

A tertiary model showed naphthalinediol docked preferentially in the central cavity in close proximity to amino acid, N102.

We have built a tertiary model of αIIbβ3 integrin cytoplasmic tails complexed with the tandem domains of skelemin and validated this model with cellular adhesion assays.

Superimposition of our tertiary model with αIIbβ3 heterodimer reveals steric clashes, making it extremely difficult, if not impossible, for both the subunits to interact with skelemin in the presence of intersubunit clasp.

To approximate an accurate tertiary model of the S. mansoni glucose transporters SGTP1, SGTP2, SGTP3 and SGTP4 we used several protein structure prediction servers, namely FOLDpro [ 60], I-TASSER [ 61], 3D-Jigsaw [ 62], LOOPP [ 63], Phyre2 [ 64] and SwissModel [ 65].

Primary, secondary, and tertiary modelling unravel the functionality of the HePS-producing LAB strains in a food environment.

The software is developed for one-step kinetic analysis to directly construct tertiary models by minimizing the global error between the experimental observations and mathematical models.

Rosetta uses a variety of methods to predict secondary structure and, in the case of these models this program builds tertiary models de novo [ 48].

In addition, we have used quaternary structural information, estimating the extent that the tertiary models will assemble into the expected quaternary vault structure.

The accuracy of domain assignments relies on the quality of the tertiary models, which usually decreases with the size of the target proteins because of the limited ability of ab initio folding simulations (Zhang, 2008).