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Standardized vocabularies are used to annotate text and data with medical terms identified by unique identifier codes that can be parsed by computers and linked to equivalent terms contained in other data sets.
However, "objective approaches" based on search terms identified by text analysis are increasingly being applied.
However, medical terms identified by MetaMap are not necessarily important, such as patient, doctor, treat, diagnosis, and other words.
Additionally, to code for potential chemicals used in chemical asphyxiation, we searched for terms identified by Azrael et al. (Azrael et al. 2016) and also noted any additional chemicals found in our review of 2400 records.
The top terms identified by TerMine included "secretion system", "Ti plasmid", "outer membrane", and "nuclear import".
Interestingly, for many of the relevant terms identified by both SLEPR and GSEA, SLPER revealed a higher significance compared to GSEA in general.
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And we compared them with the functional term identified by different methods on same datasets [ 12] (Table 1).
Precision is the proportion of true positives among all terms identified as PHI by the software (true positives plus false positives).
CTD's Web service would then process the annotations and compute the results against the curated data set, providing the user with recall, precision, response time and a detailed list of curated terms, text-mined terms and text-mined term hits (i.e. curated terms successfully identified by the text-mining tools either by a synonym to the term or by the term itself).
For contigs previously identified as tissue-specific or expressed in all tissues (see "Tissue specificity" above), tissue-unique GO terms were identified by finding GO terms associated with tissue-unique contigs which were not associated with contigs from any other tissue.
In the current implementation, identities of gene terms are identified by using a collective entity disambiguation method, whereas disease terms are recognized through a list of vocabularies.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com