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Therefore there were slight changes in the GO term analysis results between the two sets of class 2 genes.
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GO term analysis resulted in many various predicted functional annotation terms (FATs) for the two gene subsets with significant clustering.
The long-term analysis results are compared against those obtained using extreme environmental conditions and environmental contour-line methodology.
In the form of statistically enriched terms, analysis results are visualized within the rich structure of a GO hierarchical tree, thus becoming much comprehensible.
The GO terms analysis resulted in 26 enriched GO terms in the upregulated overall heat responsive genes and 9 enriched GO terms in the downregulated heat responsive genes (Additional file 4) with an up to 8 fold GO enrichment.
Next, we show the properties of the genes with high Odds Ratio scores in yeast and human by GO term analysis (the results for mouse have already been shown in [ 36]).
In mdx animals myostatin inhibition was extremely effective at increasing muscle size and strength in the short term, however long term analysis yielded mixed results.
The GO term analysis showed consistent results, with the significantly regulated genes of putative CSCs being involved in stem cell related biological and development processes.
A gene ontology (GO) term analysis of our results (Table 1; see also Tables S2 and S3) revealed that processes such as metabolism, cell cycle, DNA replication, and ribosome biogenesis are primarily upregulated in NBs.
Besides these terms, the analysis result of SCLC shortest path genes showed that they were significantly enriched in cell adhesion processes, suggesting that genes in this term might play an important role in differentiating SCLC from NSCLC (see additional file S6).
The percentage of variance explained by each QTL was estimated from a drop-one-term analysis of results in the global model.
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