This graph and GO term analysis indicate that the majority of TAF9B-only peaks are detected in distal regions relative to TSS of genes and those distal peaks tend to be associated with neuronal genes.
Gene Ontology term analysis indicates that the only statistically overrepresented gene class among the up-regulated genes was genes encoding structural components of the cuticle such as collagens (Table S3).
GO term analysis indicates that these "stable" and "invariable" genes are involved in various biological processes, such as, chromatin modification, (BAZ1B, CHD2 and MECP2); mRNA processing (SRRM1, RBM25, CPSF7) and neuronal cell adhesion (CDK5R1, NLGN2, ASTN1).
GO term analysis indicates that most genes from each of the three tissues are associated with terms that are found only for that tissue, i.e., each tissue has a distinct set of functions that is associated with extended 3'UTRs and small RNAs (Additional file 1: Figure S4e and Additional Table S4).
Our Eomesa ChIP-seq data revealed 6,014 binding sites without significant detection of Smad2 at the same sites, and functional GO term analysis indicates that genes with proximal binding of Eomesa without Smad2 have a potential role in neurogenesis and somitogenesis.
The results of this analysis indicated that indeed similar disease terms to CoPub were found by DAVID (for the results of this analysis see Additional file 4).
GO Term Enrichment analysis indicated that mainly GO terms connected to boron and lipid transport were effected in fou2.
A GO term enrichment analysis indicated that "cell wall metabolism" was significantly depressed in the long term by cold stress in S. habrochaites, but was transiently induced by cold stress in S. lycopersicum.
The drift, diffusion and source terms derived from stochastic analysis indicated that evaporative demand had greater influence on the dynamics of the CAD than solution chemistry.
GO term classification and KEGG pathway analysis indicated that the levels of transcripts changed significantly in "metabolic process", including "terpenoid biosynthetic process".
