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On the other hand, there is some empirical work with the templates identified in this SM (Alferez et al. 2014; Nakanishi et al. 2007; Oliveira et al. 2014).
In this study, we describe a new template-based method for the local refinement of ligand-binding regions in protein models using remotely related templates identified by threading.
In the meantime, it is possible to find empirical work with the templates identified in this SM, such as the ones from Alferez et al. (2014), Nakanishi et al. (2007) and Oliveira et al. (2014).
Peptide templates identified from comparative endocrine studies have also provided valuable insights in this respect and indicated novel approaches to address associated conditions such as obesity and infections at the same time.
The idea here, therefore, would be to characterise naturalness via multiple templates (identified, potentially through clustering), and then to measure the naturalness of a persona of unknown provenance by assessing the extent to which it fits the templates known to be natural.
The twenty-four templates identified exactly two-hundred and fifty different metrics (Table 1).
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Preserving legacy clinical content models using openEHR templates, identifying correct conversion rules for meta-data, and formulating a good strategy to find the correct sub-ENTRY type during conversion will be investigated in future studies.
2. Survey of PICO terms of interest: Participants were asked to fill in a minimum of two blank PICO templates identifying a series of clinical problems, therapies and/or outcomes that they considered important in their specialty area.
The use case template identified in the Bragança and Machado's paper (Bragança and Machado 2005) specifies the variation points through OPT and ALT tags.
Phyre-de-novo combines the output of both HHpred and Phyre2 and in case no good template identified, also does template-free modeling.
A BLAST search using the E. coli mutT sequences as template identified, in addition to mutT1, mutT2, mutT3, the hypothetical ORF Rv3908, which we have designated as mutT4.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com