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Meanwhile, a part of LUT templates are selected to keep high quality of recovery images in the reconstruction process.
Templates are ranked by their SP-scores and the ligands corresponding to the top 100 templates are selected as template ligands for ligand virtual screening.
Thus at first ligand-bound structural templates are selected from the database of already known protein-ligand complexes by a threading (fold recognition) algorithm.
An appropriate template or set of templates are selected from a pre-defined list of templates that match the specified lipid abbreviations.
Then the templates are selected to build the structure models for the query protein sequence using MODELLER [28].
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In template selection, the memory overhead was around 6.1 MB when 20% templates were selected to be the representatives.
These templates were selected based on the best BLAST E-values found for the amino acid sequences matching with the query sequence, using a cutoff value of 0.5 for the alignment score.
Since the RNA templates were selected based on the poly-A tail, thus the antisense transcripts were likely polyadenylated.
Here, inner atoms in the rough templates were selected as the catalytic atoms.
Comparable chromatin templates were selected and used in the assays (arrows).
Size range of templates was selected by loading the entire processed sample on a 2% agarose gel and excising the gel region of 50-400 bp.
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CEO of Professional Science Editing for Scientists @ prosciediting.com