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Reverse transcription of the RNA was performed with the PrimeScriptTM 1st strand cDNA Synthesis Kit (TaKaRa) following the recommended protocol for synthesis of real-time PCR template using random primers.
First-strand cDNA was synthesized from 1 μg of total RNA template using random hexamers according to the high capacity cDNA archive kit (Applied Biosystems).
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These were used as first-strand cDNA templates synthesised by using random hexamer primer.
For qRT-PCR analysis of Dictyostelium samples, total RNA was extracted from growing cells and used as template to generate cDNA using random primers (Roche 1st Strand synthesis kit).
Briefly, 1 µg of RNA template was reverse transcribed using random hexamer primers in buffered conditions (1× synthesis buffer; 0.1 M DTT, 40 U/µl RNaseOUT™; 15 U/µl Thermoscript™RT).
Two μg total RNA served as template for cDNA synthesis using random hexamers and the Omniscript cDNA Synthesis Kit (Qiagen).
The RNA was used as a template and reverse transcribed by using random hexamers and Superscript transcriptase (Life Technologies).
Using 1 µg of total RNA as template, single-stranded cDNAs were synthesized using random hexamers and TaqMan reverse transcription reagent kit (Applied Biosystems, Branchburg).
One µg of total RNA from each sample was treated with amplification grade DNase I and then used as a template for the reverse transcription reaction, using random hexamers and SuperScript II Reverse Transcriptase (Invitrogen).
With mRNA fragmentation as template, first strand cDNA was synthesized using random hexamer-primers and SuperScript II.
The purified mRNA was fragmented by the RNA fragmentation kit (Ambion) and applied as template for first-strand cDNA synthesis using random hexamer primers and reverse transcriptase (Invitrogen).
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