Sentence examples for template structure with from inspiring English sources

The most successful type of structure prediction, known as homology modeling, relies on the existence of a "template" structure with sequence similarity to the protein being modeled; structural genomics' goal is to provide sufficient representation in solved structures to model most of those that remain.

Advantageously RPs using DET not only identify parity situations but also approximations to the compared template structure with given precision.

Figure 2c shows a schematic plan-view of the sample in order to give a visual idea of the template structure with nanocavities, while Figure 2d reports the relative TEM image.

The three-dimensional structures were calculated on the basis of the experimentally derived distance and torsion angle constraints using a dynamically simulated annealing protocol starting from a template structure with randomized backbone ϕ and ψ torsion angles.

Based on available experimental template structures with substrate, phosphate, and/or metal ions bound, computational structural analysis has further supported the presence and correct position of phosphate and metal-coordinating residues in all PPPs, NIFs, and PPMs, with the exception of PPM8, which shows metal coordinating residues but lacks an obvious phosphate-binding arginine or lysine.

The results we presented in the article are for coarse-grain template structures with a one-point-per-residues representation centered on the C3′ atom.

The model showed an overall well-conserved catalytic site compared to the template structure TrMan5A, with the only notable difference seen on the aglycone side where AnMan5B had a tryptophan (Trp242) instead of a leucine in the template (Fig.  6).

FFAS03 returns standardized variable ("Z") scores for comparisons between a query and a solved template structure sequence, with a score of 9.5 cited by the authors as being statistically significant.

A two-step template-induced vertical deposition technique was introduced to fabricate the colloidal crystal heterostructures due to wettability differences and spatial confinement of the templates structured with microchannels.

In the present paper, we have synthesized a biomorphic ceramic material from oak wood as biological template structure and infiltration with zirconia-sol.

The templates for lipid categories are stored in each category specific module as MDLMOL strings corresponding to template structure data, along with mapping of each template ID to additional information such as atom numbers and atomic coordinates for attachment points, number of chain carbons in the template, head group name, lipid category, main class, sub class, etc.