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In the proposed model, this concept is recognized by a new template structure including the appearance filters, constraints, and a set of parameters trained by latent SVM.
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Sequence segments without a template structure included eIF3a-CTD (residues 496-964), eIF3c-NTD (residueIF3g251), eIF3g linker (residues 97-183), eIF3j disordered regions (41-145) as well as other missing loops or terminal domains.
The standard template structures included in FlaME are: cyclopropane, cyclobutane, cyclopentane, cyclohexane, benzene, cycloheptane, and cyclooctane.
add structure fragment (as pre-defined template structure).
This paper presents a pattern template structure for defining agent-oriented pattern templates.
We used the template structure to define eight agent-oriented pattern templates.
(C) Errors in the template structure.
15300 trajectories were run against each template structure.
The template structure for this model was CYP2C8 [PDB:1PQ2].
However, nine ligands existed in the template structure.
No ligands are bound to the Upf1 template structure (1PJR).
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