Sentence examples for template proteins of from inspiring English sources

Newly sequenced proteomes that enter the database are automatically annotated using UniRules, and are reannotated when template proteins of the family are manually updated (26).

The first step is the identification of a template protein of known structure.

Mimotopes can potentially serve as lead compounds in the development of low molecular weight substitutes of the template protein for use in drug and vaccine design [ 23].

Both the molecular mass of the protein detergent complex and the protein content of the complex were analyzed for the peak of interest by the system template Protein Conjugate of ASTRA.

FINDSITEX on the other hand, as mentioned, employs homology modeling methods to model structures of template proteins, which are then aligned and compared to target proteins using a global structure alignment method.

To make a strict test, we only include template proteins released before May of 2006 for this test, and we also excluded the templates with sequence identity >20% to the query.

This is particularly a problem for big proteins, such as the armadillo and heat repeats and β-propellers etc, when the solved template proteins cover only part of the repeats.

3D structure of PITG_02935, PITG_02930 and PITG_06585 P. infestans BBEs were modeled based on homology with the template protein structures of Acremonium strictum 1ZR6A [ 110] and Eschscholzia californica 3D2H [ 111].

Different from COFACTOR, TM-SITE compares the structures of a subsequence from the first binding residue to the last binding residue (called SSFL) on the query and template proteins, which solve the problems of global-to-local structural comparison algorithm.

In bulk imprinting, the binding sites of the template proteins tend to be restricted within the polymer matrix and are only exposed by grinding the matrix.

Abpa and Abpbg transcripts in these genomes were predicted on the basis of homology to a set of template protein sequences (see below) using the program Exonerate [ 50].