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cDNA was prepared on a template of total RNA extracted from upper leaves taken from infected N. benthamiana and S. lycopersicum.
The fragment encoding the human Cx43 sequence was obtained by RT-PCR performed on a template of total RNA isolated from GliNS2 cells using the following primers: 5′-TATATACCGGTATGGGTGACTGGAGCGCCTT-3′ and 5′-CGGGATCCCGCTAGATCTCCAGGTCATCAG-3′.
PCR with specific primers on the template of total M. musculus DNA gave the ladder for TRPC-21A as well as for MaSat, indicating the characteristic feature of the satDNA, also caused by variable monomers organized in HOR (data not shown).
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From the TG results, it can be summarized that the MCM-41 nanoporous silica synthesized from three subsequent cycles contained almost the same amount of template (total weight loss of 36 to 41 wt.% in the range of 120°C to 500°C), demonstrating that the consumption of the organic template during the formation of MCM-41 was almost constant in each step of the multi-cycle synthesis.
For synthesis of cDNA a template of 0.5 μg total RNA was used.
Here the number of template representatives was kept to be 20% of total templates.
Typically 500 ng of template total RNA and 250 ng of random hexamers were used per reaction.
For 3′ RLM-RACE, all the reverse transcriptase steps were the same as 5′ RLM-RACE, except for the template where 1 μg of total RNA was used.
For PCR and Q-PCR analysis 2 ul of template in 20 30 ul of total reaction were used.
ERK1 RNA was obtained by one step RT-PCR performed with a template on 100 ng of total RNA extract from Rat brain.
To remove any contaminating genomic DNA from the RNA template approximately 2 μg of total RNA was DNase I treated using the DNA-free system (Ambion).
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