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Tandem analysis results from two QC beads demonstrated excellent correlation between DNA sequence-predicted structures (9 and 10) and predominant observed [M + H]+.
Proprietary software is typically provided by instrument manufacturers, but these solutions are not amenable to the tandem analysis of multiple assays.
In addition to SEQUEST [ 104] analysis (Thermo Finnigan; Bioworks v3.1), X!Tandem analysis was also performed [ 105], and peptide and protein probabilities were calculated using ProteinProphet [ 106] with SEQUEST results.
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VNTR: Variable number tandem repeats analysis; MLVA: Multiple locus variable number tandem repeats analysis.
All isolates were characterized by multilocus variable-number tandem repeat analysis, and 1 isolate was analyzed by whole-genome sequencing and single-nucleotide polymorphism analysis (10, 11 ).
Multi-locus-variable number tandem repeats analysis.
The specifically encoded proteins were selected for further tandem MS analysis.
Further tandem MS analysis of modified Rab1 decisively located the exact site of modification (Muller et al., 2010).
During the recent years, multilocus variable-number tandem repeat analysis (MLVA) has been successfully applied for molecular typing of several bacterial pathogens.
The entire lane was excised for tandem MS/MS analysis.
Characterization and short tandem repeat analysis are provided in the supplemental data (Supplemental Table S1).
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