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For this study, i.cva was run on the Brightness (in abscissa) and Greenness (in ordinate) maps for both dates, taking as a threshold one standard deviation.
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The smallest orientation contrast at which 70%% accuracy was achieved was taken as the minimum discrimination threshold.
A half of the maximum entropy is taken as a threshold between noise-like and tone-like characteristics.
A 2-fold change in spot signal intensity between treatments was taken as a threshold.
A 4-fold change in signal intensity between treatments was taken as a threshold for discussion.
Similarly, as suggested [ 40, 41], absolute values of R ≥ 0.6 were taken as a threshold to detect significant co-expression.
The probability of this rare event was taken as a threshold, and a node was considered a hub SNP when its P value was smaller than the threshold.
If the rat responded to the stimulation by withdrawing the paw 5 times out of the 10 trials then it was taken as a threshold.
Untransfected SH-SY5Y cells were used to establish a threshold for green fluorescence (up to 10 arbitrary fluorescence units in a typical case), and which was taken as a threshold for positivity (Fig. 4C).
Each value is taken as a threshold for calculating true positive fraction (TPF) and false positive fraction (FPF .Then ROC curve is plotted and AUC value is calculated according to these TPFs and FPFs.
In order to avoid the need to specify this threshold, we considered a sequence of equally spaced thresholds during the reconstruction and took as result the threshold leading to the best results (i.e., best recovery of the original connectivity).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com