Sentence examples for take aligned from inspiring English sources

The model estimators described above take aligned sequences as input and select the most appropriate model based on the probability (the likelihood) of the ML tree.

It takes aligned short read data in BAM format as input.

As input, viRome takes aligned sequence data in the BAM format.

Here, we present viRome, a package for R that takes aligned sequence data and produces a range of essential plots and reports.

MethylExtract takes aligned reads as input and therefore we first compared the methylation profiling quality achieved on artificial bisulfite data when using two different tools for aligning bisulfite-treated reads; NGSmethPipe and Bismark.

Here, we present viRome, a package for R, which takes aligned sequencing data in the BAM format (Li et al., 2009) and produces a variety of plots and reports that are essential to the analysis of data from viral siRNA datasets.

Devise a portfolio that measures and limits the amount of risk you can afford to take, align it to your specific goals — college financing, retirement, estate building — and leave it alone.

A majority of these schools do not have satisfactory Internet access or enough computers to take assessments aligned with the new Common Core State Standards, the report says.

From 28 complete phage genomes, each ORF was taken and aligned individually with its orthologs.

All protein sequences with a significant hit were taken and aligned (BioEdit v.7.0.5.3 [ 38]) with the orthologous protein sequence.

We took the aligned clusters from 2008 that were combined into a supermatrix in the previous analyses and analysed them independently, as single genes.