Exact(1)
Base-by-base conservation level scores were taken across all positions of the mapped TFBS and then averaged for the different categories compared in Table 2 and Figure 2. Individual TFBS were broken down into putative contact and context positions using the TRANSFAC site table annotations.
Similar(59)
Based on the table (Annotation Illumina Human-WG-V3-controls_hg18_V1.0.0_Aug09.txt) provided in ReMOAT (33) (http://remote.sysbiol.cam.ac.uk/sequence.php), probes with poor quality scores were excluded.
For supplementary tables annotations using PANTHER database [ 28] (http://www.pantherdb.org/) were included.
To obtain a final annotation table, the annotations from each database were analysed using the BLAST scoring system [ 62] to obtain the best annotation for each transcript.
Table 4 Annotations of gene located 7302R-specific SNPs Chr.
Table 2 Annotation of MassBank data KEGG KEGG MINE PubChem Features annotated 84.5%98.6%98.5%5% Correct annotation present 68.6%66.8%89.8%8% Median # of candidates 3 46 1714.5.
An overall error rate is computed using the measure Δ described in McKenna et al. [11]: Table 4 Annotation errors after accumulation Sequence annotation Atomic instructions Δ ins Δ sub Δ delt Erroneous annon.
Table 2 Annotation performance using out-of-vocabulary semantic concepts.
NMR data table, gene annotation table and NMR spectra.
The annotation tables contain annotations from several sources, including Redfly, Flybase and the Gene Ontology.
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