"Investors need to know what's at stake," says Brendan O'Donnell, oil campaigner at the UK-based non-profit Global Witness, which tabled a query at the annual meeting in The Hague.
It then searches structural similarities with the hash table for a query in the database.
Using each protein sequence listed in Table 1 as a query to search the Conserved Domain Databases, we found that each contained an N-terminal domain with high similarity (BLAST E value < 6-30) theThiFThifamilyly domain (Pfam00899) (Table 2, Figure 2c), suggesting that this portion of all the proteins in this study performed a similar function.
PSI-BLAST search of the non-redundant database with the Bacteroides thetaiotaomicron α-glucosidase SusB (97A1_BACTH, see Table I) as a query sequence yielded 32 protein sequences with the worst (the largest) E-value of 2 × 10-20 during the first round.
HAPPI users can retrieve a list of protein interactions showing the following fields in a table: the query protein, a relationship symbol (currently implemented as bi-directional binding, represented as "<=>"), the data source of the interaction, and a confidence rating of 1 to 5 stars.
If the design of a RDB is inefficient, the number of join operations between tables increases when a query is executed, which affects the query response time.
However, this can result in splitting the set of tables used in a query across public and private locations.
First, a specific parameter (treenode) can only be extracted via the link between the TreeNodePathId in the data table (SDETreeNode) and the TreeNodeName in a reference table (SDEDomainModelItem). Second, a query involving two research parameters involves 1 inner join of the data table SDETreeNode.
Additionally a query table of 147 specific accurate mass neutral losses and their associated formulas, names, and substructures is provided.
The agreed response time significantly affected the time consumed answering queries: the longer the agreed response time was, the longer was the effective time consumed answering a query (Table 1).
The 14 canine DCM candidate genes were identified on the canine genome by means of a BLAST analysis [ 32], using available canine and human DNA sequences as a query (Table 1).
