Sentence examples for systematic chip from inspiring English sources

Here, utilizing systematic ChIP studies, we demonstrate endogenous recruitment of ERα to above uterine gene promoters following estradiol-17β (E2) injection in mice.

With this in mind, we propose to select a small set of conserved TFs and Histone modifications to perform systematic ChIP analyses in all the selected new models in order to annotate candidate regions linked to gene repression or activation.

In S. cerevisiae, the TF-gene binding information is provided by the systematic ChIP-chip experiments.

On the other hand, systematic ChIP-chip data are still not available for most species other than the budding yeast.

TF activities in the cell cycle can be inferred by integrating the microarray expression data with systematic ChIP-chip data.

This is achieved by integrating microarray expression data with systematic ChIP-chip data [ 19] or motif discovery data [ 20] using the BASE method [ 21].

In yeast, the genomic occupancy of 203 transcription factors in rich media conditions was determined in a systematic ChIP-chip experiment [ 36].

Recently, several systematic ChIP-seq studies have been published, providing genome-wide mapping data for HATs and acetylation marks in resting human T cells [ 12, 13].

In other species where systematic ChIP-chip data is not available, in-silico motif discovery and analysis provide us with an alternative method.

In conclusion, we present a method to identify CCRTFs by integrating microarray cell cycle data with systematic ChIP-chip data or motif discovery data.

In the systematic ChIP-chip experiment performed by Harbison et al., in vivo binding sites across the whole genome for 203 yeast TFs were identified under YPD condition [ 19].