The objects include gene/protein names, symbols, synonyms, reference sequences, diseases, drugs, etc.
The taxonomy is illustrated with the OBO-Edit software, showing definitions synonyms, references, and extended information.
This tool was realized using a Microsoft SQL Server 2005 as the relational database backend for storing chemical sum formula with appropriate source tagged annotations (names, synonyms, cross references, etc).
A complete version is available with all the ChEBI data properties such as synonyms, cross-references, SMILES and InChI.
For all NeuroMorpho.Org ontologies, we use the rdfs:label, oboInOwl:hasExactSynonym, and OboInOwl:hasDBXref to store the preferred name, synonyms, and references, respectively.
A misnomer synonym used in reference to 2003 mutual fund scandal.
To facilitate reference, American synonyms which are beyond doubt, have been inserted under many species.
Our gene indexers found the list of tagged gene names appended to HTML files and hyperlinked to a table with more information (the gene identifier, source dictionary and synonyms) a particularly helpful reference tool.
We then investigated how to exploit the gene ID and find synonyms and variants in reference databases, but we quickly concluded that this strategy would have brought too much noise than recall.
It comprises international botanical terms, references, synonyms, and phylogenetic information and is open-source.
With a focus on small molecules, it contains names, chemical structures, synonyms, database cross-references, links to relevant literature, and classifications based on structural features and biological activity.
