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Alignment of this physical map with a genetic map of Brachypodium [15] identified long-range collinearity between the physical and genetic maps, thereby supporting the physical map assemblies and providing a useful resource for map-based gene isolation by aligning BACs with genetic markers and recombination data.
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Genetic map position support LODs ranged from 12 to 228, while the physical map position support LODs ranged from 0 to 0.1.
The physical map was supported by the NSF under Grant No. 872635 and proteins analysis under Grant No. 0487654.
To support the increasing interest in map-based gene cloning of important genes, the physical map of Arabidopsis thaliana was constructed, resulting in deeper understanding of genome structure and evolution (Mozo et al. 1999).
When our genetic data supported a marker order different from that of the public linkage map, but in accordance to the physical map, we modified the relative position (cM) of the markers along with the corresponding sequence.
The physical map described in this paper is a further step in building the infrastructure to support complete sequencing of the cichlid genome.
Positions of these markers were determined through alignment on the physical map of lettuce19.
BES from the physical map were also used to integrate a genetic map.
To integrate this genetic map with the BAC-based physical map, the sequences of genetic markers were aligned with BES from the physical map using BLAST.
The physical map represents the first generation of the physical map of chickpea.
The physical map represents the first genome-wide, BAC/BIBAC-based physical map of chickpea.
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