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The argument actually shows that p ( T q m z, T q m z ) ≤ r x − ε holds for every m ≥ 0, where { q m } m ≥ 0 is the supporting sequence at the point z.
The assemblies were manually validated using Consed v19.89 in conjunction with supporting sequence and scaffold information.
Supporting sequence data for this project has been deposited with the NCBI Sequence Read Archive.
Supporting sequence data are available in the DDBJ (http://www.ddbj.nig.ac.jp/index-e.html) under accession numbers HX874250 HX894778 and AK440354 AK442468.
Supporting sequence data are available in the ArrayExpress database (http://www.ebi.ac.uk/arrayexpress) under Accession number: E-MTAB-2276.
The script verified loci of age specific variants for the presence of supporting sequence reads (≥5) in both comparison samples.
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Note that for the vast majority of supporting sequences, no experimentally determined structures are available.
GO annotation was performed on those HSPs using the e-value selection criteria and supporting sequences described for Blast2GO[ 64].
The supporting sequencing files for Figs. 3, 4 and 5 are attached as supplementary files with the manuscript.
The first W-pattern has four blocks with supporting sequences S q and S x; and the second W-pattern has two blocks with supporting sequences S q, and S x; the third W-pattern has two blocks with supporting sequences S q, S x, and S y.
Strand addresses this problem by utilizing a form of lossy compression called Minhashing [23] which still supports sequence comparison, but with a much reduced memory footprint.
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