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Therefore, there is limited evidence to support the optimal threshold value.
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Empirical studies have shown that posting guards decreases the rate of acceptance for both nestmates and non-nestmates, in support of the optimal threshold individual-level approach to nestmate recognition (Downs and Ratnieks 2000; Couvillon et al. 2008).
We also show that previous research in support of the optimal threshold theory approach to the problem of nestmate recognition can be alternatively viewed as evidence in favor of the collective formation of a selectively permeable barrier that allows in nestmates (at a significant cost) while rejecting non-nestmates.
Nevertheless, using a clustering-based approach, all individuals within 98% of species grouped with their conspecifics with high (>95%) bootstrap support; in contrast, a maximum species discrimination rate of 90% was obtained at the optimal threshold of 1.2%.
Each circle represents the optimal threshold in terms of JC.
To determine the optimal threshold values, we employed a two-step approach.
Total numbers of corrected SNPs at different MAF and Info thresholds were obtained to validate the optimal threshold of MAF and Info.
Several methods have been proposed to determine the optimal threshold.
destreak is designed to determine the optimal threshold value when max is not defined by the user.
However, this function, along with other important terms, such as cellular senescence, was not predicted by any of the top-performing methods at the optimal threshold levels.
The optimal threshold for cycle amplification was 35 based on a receiver operating characteristic curve.
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