NCU00403 and NCU00455 each exhibit unique frameshift inducing indels and both deletions are strongly supported in the sequence data.
BGT acknowledges, with gratitude, the US Department of Energy Joint Genome Institute (JGI) for their fungal genome program, in particular, for their support in generating the sequence of race O, strain C5, of Cochliobolus heterostrophus http://genome.jgi-psf.org/CocheC5_1/CocheC5_1.home .jgi-psf.org/CocheC5_1/CocheC5_1.home
Similarly, in regions where LASTZ failed to align the N2 and CB4856 sequence, there were gene models with RNA-seq support in the CB4856 sequences.
We suspected the reason for the low bootstrap support in the non-sequence-based phylogenies, and the statistically significant incongruence between these phylogenies and the MLSA data was because of homoplasy.
The catalytic performance of Rh-supported catalysts depends on the support and varies in the sequence: Ti-MgO/I > Ti-MgO/O > MgO.
Special thanks are also extended to Chloe Deodato at the U. of Washington for support in the N. oculata sequence study as well as Matt Posewitz and Robert Jinkerson for providing the sequence and annotation files for the N. gaditana chloroplast and mitochondrial genomes.
To do so, we searched for potentially domesticated "chimeric" transcripts (i.e. transcripts containing both TE and host gene sequences) backed by experimental support in the form of expressed sequence tag (EST) evidence (cp. [ 10, 11]).
However, this customization may conflict with existing quality measures for standardized information provision and decision support across the sequence of steps in the decision-making process.
Improvements in the structural annotation of gene models can be obtained through training of ab initio gene finders and, for eukaryotes, through empirical transcript support in the form of Expressed Sequence Tags (ESTs) and, more critically, full-length cDNAs [ 1- 3].
A robust cluster is defined as groups of TSSs which are in close proximity of each other in the genome, have the same direction of transcription, share a similar global expression pattern across all cells and tissues, and have sufficient support in the number of CAGE sequence tags [ 4].
