Exact(19)
Furthermore, the catalytic triad of the unliganded medaka enteropeptidase superimposes well with the bovine enzyme in complex with a trypsinogen-activation peptide analogue (Lu et al., 1999).
The modelled DXR superimposes well with its closest structural homolog but subtle variations in the charge distribution over the cofactor recognition site were noticed.
The superimposition of PoAbf model on the structure of Tm-AFase and Tx-Abf confirmed the putative role of acid/base catalyst for E371 as it superimposes well with E172 and E176 from Tm-AFase and Tx-Abf, respectively.
CNBD-A PO4 CNBD-A PO4esuperimposesCNBD-A:cAMPP43, except for the β4 and β5 strands (Fig. 6C).
The structure of Ubc9 superimposes well with the prior structure of free Ubc9 (0.55 Å rmsd), with the most notable difference being slight variation in the position of the β1β2-loop.
The overall folds of the two PHD fingers are very similar, and the conserved tryptophan of each PHD superimposes well.
Similar(41)
While the conserved regions often superimpose well, the variable regions appear non superimposable.
The structured part of L16 could be superimposed well on the Cα model of L16 determined in the crystal structure of the ribosome 50 S subunit.
The main regions of the two projections superimposed well, indicative of G-quadruplex structures in similar dominant conformational alternations in the two independent MD ensembles (Fig. 6B).
However, the curves superimposed well after 2 min post injection, where the POP-IF are based on the individual blood measures.
Although the rest of the structures superimpose well, regions encircled in Figure 6B have very different local structures.
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