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Summing up, expression in cells or addition to egg extracts of nine GFP-tagged proteins allowed us to identify at least seven novel spindle components.
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To merge the gene expression of a given gene signature to a single metagene expression value, an arithmetic mean is computed by summing up the expression values after multiplying expression values for genes negatively associated with the feature (AUC < 0.5) by -1 (Additional file 2).
Specifically, a CSR index score was calculated for each sample by summing up the expression ratios taking into account the direction of regulation of each gene by serum treatment (see Methods).
Third, for each patient, each set of genes becomes a new matrix feature by summing up gene expression values across genes belonging to each pathway.
Summing up, the expression of p75NTR in the PC12-27 cells appears to modify both the signaling of NGF and the activity of mTORC2, bringing them to levels approaching those of wtPC12.
Summing up.
We simply calculated the scores by summing up the log expression values of genes of one direction and subtracting those of genes of the other direction.
We calculated the scaled gene expression by summing up the log2 based gene expression ratios of the 50 glomerulus transcripts while taking into account the direction of the gene expression.
The function f is usually given by summing up kinetic rate expressions of the involved compounds, assuming mass action laws, or in some cases, more detailed rate equation expressions such as Michaelis-Menten dynamics [ 39].
First, we calculated the scaled gene expression score by summing up the log2 based gene expression ratios of the 87 cortex transcripts well measured in the 177 cRCCs while taking into account the direction of the gene expression.
The juxtaposition of Immelt's statement with the expression of support for Pruitt summed up corporate America's Janus-faced attitude to the Trump Administration.
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