Sentence examples for summarized read from inspiring English sources

This yielded summarized read counts for 36,229 genes annotated by Ensembl 59. 12,632 of these genes had no reads across all lanes and were not considered further.

Summarized read counts were subjected to peak calling with SICER [ 52].

The assigned and summarized reads for Alphaproteobacteria, Betaproteobacteria, Deltaproteobacteria, Epsilonproteobacteria, and Zetaproteobacteria nodes are displayed.

HTSeq [ 54] was used to summarize read counts for each gene model.

SplicePlot is an analytic tool for summarizing read data and generating intuitive, publication-quality figures for visualizing sQTL.

Diverse methods are available to align RNA-seq reads [ 7], summarize read counts, assemble transcripts [ 8], and to detect differential expression between biological conditions [ 11].

Optional output files integrate species-level results with RDP classification results and summarize read counts according to best reference sequence hit.

The easyRNASeq package combines the following steps: reading in sequenced reads, retrieving annotations, summarizing read counts by the feature of interest, e.g. exon, gene and finally reporting results, normalized or not, in formats suitable for downstream analyses.

In contrast, the TOEFL iBT Writing section requires examinees (c) to summarize reading and listening texts and (d) to write their opinions about the topic assigned, without reading texts.

To summarize, reads were trimmed to 89 bp to remove barcodes and the SbfI overhang and then quality filtered.

The seqsumm function summarizes read counts into windows of the selected size, but it also classifies paired-end mapping (PEM) reads based on their SAM flags - which consider read pairing, separation and orientation - and calculates mean window mapping quality, enabling two of the five window filters available in seqCNA.