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The study was assessed with the analytical tools available in SwissPDB viewer v. 3.6 and with the programs in the PROCHECK suite for model validation [43].
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SynBioSS is an open source software suite for modeling biological networks [ 28- 30].
The energy of the protein molecule was minimized by Steepest Descent and Conjugate Gradient method using Accelrys Discovery Studio, the most comprehensive suite for modeling and simulation solutions.
Solutions are provided with the Test Suite for every model, so by automated testing a large number of models could be imported, simulated in the deterministic Wmrk4 solver in STEPS and results compared against given solutions.
The object-oriented integrated dynamic landscape analysis and modeling system (OO-IDLAMS) provides a good example of how DIAS has been used to build a suite of models for the purpose of assessing the ecological impacts of military land use and land management practices.
The results presented in this case study indicated that the simple regression method provides an adequate alternative to the processes based DRAINMOD suite of models for estimating annual reductions in drainage rates and N mass losses resulting from implementation of DWM.
Behavioral ecologists have developed a suite of models for the evolution of fighting behavior [1].
The FIDO methodology includes an integrated modeling framework and a suite of modeling techniques for enterprise modeling.
A suite of models is available for coupling flow and mechanical deformation via permeability deformation relationships.
A suite of models was used to test for the influence of different evolutionary forces shaping mitogenome variation within and among species.
FVS is a powerful suite of models which has been linked to Forest Service forest inventory data bases and geographic information systems, evolving into a useful suite of tools for forest managers [25].
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