Sentence examples for suite database from inspiring English sources
CpG islands in Pou5f1 or Gfra1 promoter regions were identified with "The sequence manipulation suite" database (http://www.bioinformatics.org/sms/index.html) [52] using the method described by Gardiner-Garden and Frommer [53].
Reports generated from the eClinical Pharmacy Suite database were in Microsoft ExcelTM format.
The pI values of the Arabidopsis peptide sequences were obtained using the Protein Isoelectric Point of the Sequence Manipulation Suite database with pK values from EMBOSS.
The SBML Test Suite Database [ 33] could be also used as valuable tool to compare simulations obtained with different software systems beside those listed above.
The miRror-Suite database collects the information from all 18 MDBs (for humans) after removing any overlap among them.
Sensitive approaches such as hmmscan available through HMMER3.0 package, RPS-BLAST and HHblits were employed against sequence and structural profiles of various domain families obtained from Pfam (23), SUPERFAMILY (24), MulPSSM (25, 26) and the HH-suite database (ftp://toolkit.genzentrum.lmu.de/pub/HHsuite/databases/hhsuite_dbs/).lmu.de/pub/HHsuite/databases/hhsuite_dbs/
We describe BioNetwork Bench, an open source, user-friendly suite of database and software tools for constructing, querying, and analyzing gene and protein network models.
In light of these challenges, we present here a significantly-enhanced version of YPED, an open-source proteomics suite and database [13].
We have developed BioNetwork Bench, an open source, user-friendly suite of database and software tools for constructing, querying, and analyzing gene and protein network models.
The Yale Protein Expression Database (YPED) [8] is an integrated bioinformatics suite and database for proteomics research, which was significantly improved from the first version released in 2007 [9].
We report a significantly-enhanced bioinformatics suite and database for proteomics research called Yale Protein Expression Database (YPED) that is used by investigators at more than 300 institutions worldwide.
