In aligning multiple networks, Graemlin successively aligns the closest pair of networks obtained from the pairwise alignment phase, resulting in the construction of new networks from the alignments.
The insertion times of the previously identified full-length LTR retrotransposons were estimated based on the sequence divergence between the 5' and 3' LTR of each element, as determined through successively aligning the sequences using Stretcher then implementing the Kimura 2-parameter method in Distmat (EMBOSS package).
An efficient search variant of the dynamic programming method, known as the Viterbi algorithm, is generally used to successively align the growing MSA to the next sequence in the query set to produce a new MSA.
Each clade was then successively extracted, aligned and compared to the primers used for amplification.
The most efficient algorithm for addition, for instance, involves stacking numbers to be added with their place values aligned, successively adding single digits beginning with the ones place column, and "carrying" any extra place values leftward.
The students then aligned successively longer intervals of time to the same 1-meter space.
As early as the 17th century, however, pistols were manufactured with a revolving cylinder whose several muzzle-loaded chambers aligned and discharged successively into a single barrel.
However, on mandrel aligned scaffolds of successively smaller fibers the cell directionality exhibits greater deviations from the underlying fiber alignment due to the higher likelihood of interaction of cell lamellipodia with multiple, rather than single, nanofibers.
