Subsequently, we compute the reference skin probability P r (line 6) as the minimum probability value in the dilated skin probability map P S max within the 15×15 neighborhood of the reference pixel ( N 15 × 15 ( r ) ). Basically, if the reference pixel presents the skin indeed, then the value of the reference skin probability P r should behigh.
Subsequently, we computed map distances and refined the locus order with other purpose-built perl scripts.
For a given parameter set we first computed the fourth-order transfer function G(s) using Eq. 2. Subsequently we computed a second-order transfer function Γ (s) that would display similar input-output characteristics as G(s) (Additional file 1).
Subsequently, we compute a windowed Fourier transform of the current guess for the aberration-free exit wave (in the first iteration the measured exit wave is used) and the symmetrized wave.
Subsequently, we compute and analyze the motion trajectories of tumors and structures of interest.
Building on these results, we subsequently computed the time to successive spikes in both regimes, where inhibitory synaptic decay time becomes an important factor.
For each neuron, we subsequently computed the spike counts over causal boxcar windows (rectangular windows looking only in the past) of length 250 ms sliding in 10 ms steps.
We subsequently computed the z-scores of SFC values in each block (Jarvis and Mitra, 2001) by computing the distribution of coherence under null hypothesis given the number of degrees of freedom (i.e. the number of spikes * number of tapers), then calculating how many standard deviations the observed coherence differs from zero.
Subsequently, they computed the spatial autocorrelation function, a statistical technique used in astrophysics, and identified critical clustering of selected genes in the two different genetic backgrounds of these mice.
To the selected connections stored for the resulting 50 sets, we applied swapped modes between positive and negative, and subsequently computed the Z scores based on the 1000 randomized and one real connection matrices that were used in the main analyses.
