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This results in some heterogeneity in the subsequent analyses, such as the results shown in figure 3 in the main text.
The non-supercontig contigs were excluded from subsequent analyses such as comparison with related strains, gene prediction and the survey of heterozygosity and Ty elements.
However, in subsequent analyses such as mediation analyses, factors known to affect infant growth may be explored for direct and indirect effects on outcomes.
However, once this mapping step is completed, subsequent analyses (such as merging gene families into pathways) proceed quickly, and can rapidly produce clinically relevant results.
This is because slightly larger amounts are required for subsequent analyses such as specialized biochemical measurements (ferritin, cortisol) and genetics (C282Y and H63D of the HFE gene).
Subsequent analyses, such as counting anticodon usage, calculating nucleotide frequencies and strand skew values, and identifying repeated elements, were performed using MacVector (Accelrys).
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It provides a framework for determination of detection limits, confidence about fluorescent ratios and for pre-processing data for subsequent data analyses, such as cluster analyses [ 23, 28].
Indels complicate multiple sequence alignments and may skew subsequent evolutionary analyses such as tests of positive selection (Fletcher and Yang 2010; Jordan and Goldman 2012; Westesson et al. 2012).
For example, sequencing depth exerts a profound impact on the expression abundance estimation and the subsequent data analyses such as differential expression prediction [ 32].
Each independent site is responsible for obtaining a patient's informed consent for submitting his/her health information to the Registry and for using and disclosing this information in subsequent aggregate analyses, such as journal articles, annual reports, educational materials, and public health reports.
This model was then used in subsequent model-based phylogenetic analyses such as likelihood and Bayesian analyses.
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