In the post-submission experiment, we obtained 22.1% and 35.7% F1 performance by incorporating bigram features in RDE learning.
Additional filters are also available, under the group headings of gene, submission and experiment filters.
SRA metadata is organised and stored in a relational database format across a number of tables: Submission, Study, Experiment, Run, Sample and Analysis.
This component resides on the central server that interacts with the user for the experiment submission.
The statistical analyses for the microarray data as described above are included in the experiment submission available online in ArrayExpress [ 36].
The microarray design (accession number A-AFFY-81) and the experiment submission (accession number E-MEXP-940) are available online in EBI's ArrayExpress public repository [ 36].
For instance, data models uniquely added/extended for toxoMine include but are not limited to project, experiment, submission, microarray, toxoplasma mutant and antibody (Supplementary Table S1).
False submission Because laboratory experiments are conducted in person, there are generally no false submissions.
ARG customized an internet accessible MIAME-compliant Stanford Microarray Database for these arrays and created a GEO microarray platform for this and future experiment submissions.
Currently, iProX comprises an experiment data submission system and a proteome database.
