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Twenty days submergence caused greater damage even in Submergence 1 (SUB1) introgressed cultivars compared to the 14 days of submergence.
Molecular mapping allowed the identification of the major QTL SUBMERGENCE 1 (SUB1) on chromosome 9, contributing up to 70% of phenotypic variation in tolerance (Xu and Mackill 1996).
The rice Submergence 1 (Sub1) gene encodes a putative ethylene-responsive factor that allow rice to survive complete submergence for more than 2 weeks (Xu et al. 2006).
Success in fine mapping of SUBMERGENCE 1 (SUB1), a robust quantitative trait locus from the submergence tolerant FR13A landrace, has enabled marker-assisted breeding of high-yielding rice capable of enduring transient complete submergence.
In cases where a phenotype is mapped to a complex locus consisting of a tandem array of gene family members (for example, XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 21, XA21, or SUBMERGENCE 1, SUB1), each gene in the array will be given an independent locus identifier (i.e., SUB1, SUB2, SUB3, etc).
A major QTL, Submergence 1 (Sub1), was detected near the centromere of chromosome 9 and was eventually cloned (Table 2).
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Chlorophyll concentrations in 'TL3' and 'FR13A' were measured after submergence for 0, 2, 4, 6, 8, and 10 d (Fig. 3b).
Seedlings were subjected to complete submergence for 0, 2, 4, 6, 8, and 10 d under a 16-h light/8-h dark cycle.
Air, non-submerged controls; Sub, full submergence; 'TL3', upland rice; and 'FR13A', lowland rice.
b and c Leaf sheath distances I and II of 10-d-old rice seedlings after submergence for 4, 6, 8, and 10 d.
C, non-submerged control; 14 d, 14 days submergence; 20 d, 20 days submergence.
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