Sentence examples for subject sequence of from inspiring English sources

Sequence homologies were only mentioned in this study for proteins with an amino acid identity of >25% and an overlap of the query and subject sequence of >75%.

MI, Max Identity (i.e. the higher value among the identity values of the BLAST output); QC, Query Coverage (i.e. portion of the query sequence that was recognized by some subject sequence of that species); P, Primate.

Hits were restricted to those with 100%% similarity, 100%% coverage of our query or of the subject sequences of the databases, and with identical coordinates in the genome.

On the other hand, for those subject sequences of lengths larger than the threshold, all the threads in a block will perform the alignment in parallel for only one subject sequence.

All translated alignments within 20% of the subject sequence and within 8% of the top scoring subject per query are reported.

Aligned regions covered on average 35.1% of subject sequence (known proteins) length, whereas three quarters of aligned regions covered over 55.1% of subject sequence length.

Of these matches, the average percent of coverage of the subject sequence was 24%.

SEG filtering of the subject sequence is on by default in any of the composition adjustment modes.

This pair of the seed of query sequence and the part of the subject sequence with their score is called high scoring segment pairs (HSPs).

Obviously, HCudaBLAST shows a significant improvement in terms of time taken with different number of subject sequences and different size of query sequence.

Consequently, the number of subject sequences allocated to each thread is decreased.