Sentence examples for structured motif from inspiring English sources

Formally, let H[ l, u] T be an intermediate structured motif, with simple motif H as the head, and a suffix structured motif T as tail.

For i = 0,…, b, we will use the term i -prefix to denote any structured motif made of i boxes that could possibly be extended to a full structured motif conforming to the problem specification.

In this paper, we propose EXMOTIF, an efficient algorithm for both the structured motif extraction problems.

We compare our results with SMARTFINDER, the best previous algorithm for structured motif search.

If variable gaps are allowed in a motif, it is called a structured motif.

SMARTFINDER [ 6, 7], which is currently the most efficient method for structured motif search, is also a two-step approach.

Table 3 shows both the pattern and profile representation of an example structured motif with three components.

During the full-position recovery, we can also count the number of full-positions, i.e., occurrences, of each structured motif.

However, their method is only for simple motif scoring, while our method is applied for both simple motif scoring and structured motif scoring.

We study the impact of allowing 0, 1 or 2 missing components out of the 6 simple motifs in the Copia structured motif.

In more pictorial terms, the full (final) structured motifs are not determined by assembling longer and longer prefixes but rather longer and longer structured motif "subsequences".