Sentence examples for structure partition from inspiring English sources

Similarly, in agreement to previous observations, phosphorylation sites tend to be in coiled regions (see Methods for secondary structure partition).

The most well established methods for computationally predicting RNA structures focus on calculating the secondary structure partition function for an RNA sequence.

Using GPUs can greatly accelerate computation of RNA secondary structure partition functions, allowing calculation of base-pair probabilities for large sequences in a reasonable amount of time, with a negligible compromise in accuracy due to working in single precision.

In this work, we introduced a modified set of recursions for calculating RNA secondary structure partition functions and base-pairing probabilities using a dynamic programming algorithm, and implemented these in parallel using the CUDA framework for multiprocessor GPUs.

It is clear from our work that using GPUs can greatly accelerate computation of RNA secondary structure partition functions, allowing calculation of base-pair probabilities for large sequences in a reasonable amount of time, with a negligible compromise in accuracy due to working in single precision.

This layer prefixed with '/h' lists the bonds between the atoms in the structure, partitioned into as many as three sublayers.

This geometric structure partitions the entire plane into polygon cells, called Voronoi polygonal, formed with respect to n nodes in a plane.

Promising steps in this direction have come from such diverse approaches as mathematical analysis of global network structure, partitioning networks into functionally related modules and motifs, and even de novo design of networks.

As noted above, our techniques for the discrete input case would generalize to models with nonzero intrinsic firing rates, and in particular the band structure partitioning phase space into initial conditions corresponding to different numbers of spikes fired before inputs are depleted would carry over analogously.

The search mechanism of SSAs serves as a good basis for algorithmic level parallelism due to its structure partitioning the search process into D number of offset- i investigations.

Free-energy profiles and disconnectivity representation of the energy landscapes show that the monomer structures partition into four distinct basins.