A prominent example is the mis-modeling of time-varying external fields which can manifest itself as spurious static structure, for instance, in the lithospheric field.
Because of their generality, the presented tools could clearly be used to study different databases with a genealogical structure, for instance in the case of bibliometrics or Wikipedia studies.
Studies of replication fork localization by comparing the distribution of SeqA structures with the distribution of replication forks in rapidly growing cells indicate that on average 2.5 replication forks are co-localized in a SeqA structure (for instance, in cells with 12 replication forks, the forks are localized to 4 sites in some cells and 6 sites in others) [15], [24], [25].
In contrast, leech ganglia retain a specific internal structure suitable for specific behaviors, structured for instance in mechanosensory neurons, interneurons and motoneurons.
In addition, the complexes may also exist in alternative conformations that have not necessarily all been captured yet by crystal or NMR structures, for instance in the case of the large conformational changes of the BtuCDF complex (Hvorup et al., 2007).
For a song with the structure A,B,C,D,E, for instance, in which each letter represents a particular whistle, buzz, or trill, the birds heard pairs of syllables in a mixed-up order: DE, CD, BC, and AB.
It processes input files directly extracted from GenBank database, providing visualisation of the repeats location in the genomic structure, so that for instance, in most mtDNAs the user can check if the repeats are located in coding or non-coding region (and in the first case in which gene), and how far apart the repeat pair(s) are.
Cracking of concrete has deteriorating effects on the behavior of reinforced concrete structures, which results for instance in stiffness reduction and increase of permeability.
This approach is particularly useful when several crystal structures are available (for instance in the case of allosterically regulated enzymes).
Although no real sequence similarity could be detected, IGS enhancers must share the same mechanism of action, which likely is in their secondary structure; for instance, it has been observed that Xenopus enhancers work very well in mammals and in plants.
Each of these reactions may take place while bound to various adaptor and scaffold structures, as is common for instance in MAPK cascades [ 14].
