Sentence examples for structure coordinates from inspiring English sources

In summary, we show that SiteHopper is able to identify structural similarity between potential binding sites that have been detected objectively from protein structure coordinates.

The conformer structure coordinates are available in supporting information.

At the same time, the protein structure coordinates were assembled in the Brookhaven database.

The ligand docking simulations were conducted using the RXRα crystal structure coordinates from 3FUG PDB.

The structure of the compounds was rationally designed based on the available crystal structure coordinates of bacterial TPase.

The X-ray structure coordinates of the studied thiazoles were used for geometry optimization followed by frequency calculations.

All four systems also display this geometrical structure, coordinating the oscillations of one or two variables of the oscillator.

Using a simple, original, nonlinear method based on return maps, we previously found a geometrical deterministic structure coordinating such fluctuations in populations of various cell types.

The PepBind database also maintains a repository of structure coordinate files, PDBML [27] data files and protein peptide interaction files generated by PICI tool.

The user can download (i) structure coordinate files and (ii) topological and charges distribution maps images from the T-cell receptor-interacting surface of pMHC-I complexes.

This tool parses the structure coordinate files, removes the hetero atoms and water molecules, and predicts the interaction based on coordinate distance between atoms of amino acid residues of small peptide and the protein.