Sentence examples for structural mining from inspiring English sources

Structural mining and graphic representation were done by PyMol [ 79].

A simplified example of structural mining is the discovery of motifs in sequences surrounding a specific site, e.g. for a class of known post-translational modifications, as demonstrated in Figure 3. Biological sequences with the site of interest can be retrieved from public repositories and aligned with the common site as the central anchor point.

Hence, for a newly determined protein structure, mining the structural databases enables the identification of protein structures/sub-structures similar to the given structure [13] [18].

Extended functions are provided for cases the following software tools already pre-installed on the local computer (both freely available): Open Babel is a C++ library for chemoinformatics [15] (Open Babel is used by CheS-Mapper for 3D structure computing, SMARTS matching, structural fragment mining, and 3D alignment).

The Construction Machinery segment offers products for civil engineering and construction, building and structural demolition, mining and excavation such as hydraulic excavators, wheel loaders, and mining dump trucks.

We use the CheS-Mapper program to apply structural fragment mining to a small dataset with structural similar compounds.

Open Babel is a C++ library for cheminformatics that can be used for additional 3D computing, matching of SMARTS (Smiles Arbitrary Target Specification) fragments, and structural fragment mining.

The structural fragment mining can be configured by the user with various parameters: the minimum frequency defines a threshold for the number of compounds that must be matched by the fragment.

We combined a literature-based structural information mining and manual structural visualization approach in an iterative fashion to identify and map features of 3D domain swapping to structures.

Structural data mining performed by the fitness function in Genetic Algorithm gave pattern identities between HIV-1 protease (wild type and mutants) of sub type B against organic leads and FDA approved inhibitors of HIV-1 protease.

According to one western expert on the Chinese coal sector, mine degasification equipment and structural reinforcement of mine shafts would raise production costs five-fold, making them far too expensive to implement.