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Molecular dynamics simulations on the control structural coordinates of the WT RT/DNA/TFV-DP RT/DNA/TFV-DPture [45] did not crystalny structurent structural changes, suggesting that the modeling protocols do not alter the structures in ways that are not related to the K70Q or Q151Mc mutations.
The analytical process of translating structural coordinates into a complex 3-D structure can be a challenging and engaging computational exercise for students.
Thus, to dissect the effect of the observed mutations on the binding of the ligands, we have rebuilt all the ligands in our β-mannosidase models for the four species by extrapolating their structural coordinates and positional information from the template structure.
The impact of X-ray structure-based electrostatic calculations on the functional interpretation of these structural coordinates, on providing new explanations for experimental observations, and for the design of more focused additional experiments is illustrated by a number of key examples.
The goal of homology modeling is to model or predict the structural coordinates of a query protein based on the known structure of a sequence homology (template).
For the monomeric form, the structural coordinates for decoron corresponding to 1XCD were modified by modelling the structure of the missing N and C-terminal amino acid residues (1 21, 327 330) of one of the two molecules found in the dimeric form to create one full length decoron molecule.
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The coherence between velocity fluctuations of wind turbulence at any two arbitrary spatial points is considered in the global wind coordinate system rather than in the global structural coordinate system.
A set of universal expressions for six components of buffeting forces is first derived in association with oblique cross-sections of bridge components, in which the buffeting forces are formed with respect to the wind coordinate system and then converted to those with respect to the structural coordinate system.
The Reduce program [ 42] was used to predict hydrogen atom positions within structural coordinate files; this step is required for automated detection of hydrogen bonds using the CHAIN program [ 32].
For the structural coordinate data, we assume that the mean of the distributions of t's and u's is zero: t~??(0, σ t ), and u~𝒩(0, σ u ).
This work develops equations of motion for a jointed structure in terms of the structural modal coordinates and implements a reduced-order description of the microslip that occurs at the interface between components.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com