Sentence examples for structural alignments from inspiring English sources

COOT was used for manual building of the structure and structural alignments.

Structure similarity searches and structural alignments were performed using the DALI program [ 25].

The nodes of the graph represent protein structures and edges represent structural alignments.

First, the STRIKE matrix is not estimated on structural alignments but on single structures.

Structural alignments indicated a nonuniform effect on peptide structure following replacements at site −13.

The secondary structure assignment of the sequences was carried out using STRuctural Alignments of Proteins (STRAP) (Gille and Frommel 2001).

Sequences were trimmed to remove overhangs and aligned using ClustalW [54] without gap penalties to preserve structural alignments.

The structural alignments used as gold standards were carried out by the TM-align program [30].

Not only improved the quality of template database, this operation also reduced the number of time-consuming structural alignments.

After 20 times of structural alignments, all the ligands in templates will be mapped to the query.

After 20 times of structural alignments, the ligands in templates will be mapped to the query (e).