Sentence examples for stringency cut from inspiring English sources

Using the same stringency cut offs, only two genes, LCN2 and WRN2, were found on both lists.

High confidence CHD1 and CHD2 peaks were calculated using model-based analysis for ChIP-seq (MACS) with a stringency cut off of 1 × 10-15 and binding sites within 200 bp or less were merged [ 37].

BLAST searches of the GSR dataset were based on a representative DNA binding domain from each of the ten major ERF subgroups (I-X) [ 58] using low stringency (cut off value = 10).

The percentage overlap is above 60% even at the lower stringency cut-off of P≤10−4 (for p73), supporting the similarity between p63 and p73 binding, and a further indication that sites in this range are bona fide p73 targets.

These results indicate many p73 sites from the lower stringency cut-offs represent true p73 binding targets, consistent with the notion that transcription factor binding affinities in vivo represent a continuum, rather than simple presence or absence of binding [29], [30].

Here, the values for the low stringency cut-off were taken.

The high stringency cut-offs used in this figure highlight the most significantly shifted sites (Fig. 4B arrows).

Of the 510 genes, 219 had significant female-biased expression (q < 0.5; a reduced stringency cut-off was used given microarray data tend to have higher variance).

To this end, an automated GO-annotation of the sequences of contigs and singletons that showed a significant similarity with a Uniprot entry was achieved using the Blast2go software [ 91], with a stringency cut-off of 1e-6.

Contigs with more than 5 questionable clones were split up and re-aligned with the DQ-er function in three steps of increasing stringency (cut-off values 1e-24, 1e-27, and 1e-30).

This was in concordance with RT-qPCR analysis that revealed a massive up-regulation in IL-10 mRNA (Fig.  6g).>> -wrap-foot> A minimum of 3 animals per group were independently analyzed (stringency cut-off: p < 0.0001 above controls) Functional parameters characterizing the cardiovascular system were measured 24 h, 14 days and 28 days after I/R with a pressure volume catheter (Fig.  8a h).